MAGI - Jobs

MAGI is a tool to quickly find and score consensus between metabolite identifications and gene annotations. Upload FASTA and metabolite files here to begin.

If you found MAGI to be useful for your research, please use the following citation:

Onur Erbilgin, Oliver Rübel, Katherine B Louie, Matthew Trinh, Markus DeRaad, Tony Wildish, Daniel Udwary, Cindi Hoover, Sam Deutsch, Trent R Northen, Benjamin P Bowen. MAGI: A Method for Metabolite Annotation and Gene Integration., ACS Chem Biol. 2019 Apr 19;14(4):704-714. doi: 10.1021/acschembio.8b01107. DOI: 10.1021/acschembio.8b01107 Epub 2019 Apr 4. PMID: 30896917.

Your Job ID is 70ee5000-3667-4539-a7ce-75d08dac81db

Your Job URL is magi.nersc.gov/jobs/?id=70ee5000-3667-4539-a7ce-75d08dac81db

ERROR: NERSC seems to be down. MAGI jobs will either not run or be extremely slow during this time. You can learn more about the current status of NERSC by going to this URL: http://www.nersc.gov/users/live-status/

Attention: With the public release of MAGI, many users have noticed extreme sensitivity of MAGI to the exact inchi-key used for original_compound. The table of inchi-keys that we use can be found here https://magifiles.nersc.gov/processed/unique_compounds.csv.gz. We hope to have a generalized solution to these problems soon and apologize for any inconvenience this may cause.

Files (Find Specifications Here)

Personal Information

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For help, click here.

MAGI Options

Need example files?

Download here: (.zip)

Additional Parameters

Advanced Search Parameters

MAGI score weights:

Accurate mass search parameters:

Notes